Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A3BPQ9Y5P4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 FGD5P1-202ENST00000614866 2498 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC106881.1-201ENST00000605849 3329 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 C2orf27AP3-201ENST00000434123 579 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC114812.1-204ENST00000449669 728 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AC145423.3-201ENST00000615987 467 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AL354718.3-201ENST00000616414 581 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 CR382287.1-201ENST00000623954 586 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ACE3P-201ENST00000423435 1973 ntBASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.94■□□□□ 0.3
COL4A3BPQ9Y5P4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 PCDHA3-202ENST00000532566 4594 ntBASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ACTBP8-201ENST00000403258 1108 ntBASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 KRT90P-201ENST00000549264 1064 ntBASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 AC025279.2-201ENST00000569730 653 ntBASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.93■□□□□ 0.3
COL4A3BPQ9Y5P4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms