Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 RN7SL560P-201ENST00000577943 264 ntBASIC17.65■□□□□ 0.42
CCDC96Q2M329 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC96Q2M329 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC96Q2M329 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 TUBB1P2-201ENST00000422712 1306 ntBASIC17.65■□□□□ 0.42
CCDC96Q2M329 TUBB1P1-201ENST00000503144 1300 ntBASIC17.65■□□□□ 0.42
CCDC96Q2M329 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC96Q2M329 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC96Q2M329 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC96Q2M329 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC96Q2M329 AL137783.1-201ENST00000623494 1896 ntBASIC17.65■□□□□ 0.42
CCDC96Q2M329 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC96Q2M329 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC96Q2M329 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC96Q2M329 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC96Q2M329 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CCDC96Q2M329 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AC004466.1-201ENST00000599515 1080 ntBASIC17.64■□□□□ 0.41
CCDC96Q2M329 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC96Q2M329 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC96Q2M329 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC96Q2M329 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC96Q2M329 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 PCDHA3-202ENST00000532566 4594 ntBASIC17.63■□□□□ 0.41
CCDC96Q2M329 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC96Q2M329 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC96Q2M329 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC96Q2M329 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC96Q2M329 MIR1908-201ENST00000410394 80 ntBASIC17.63■□□□□ 0.41
CCDC96Q2M329 CD8B2-202ENST00000417670 633 ntBASIC17.63■□□□□ 0.41
CCDC96Q2M329 POM121L8P-201ENST00000417732 1281 ntBASIC17.63■□□□□ 0.41
CCDC96Q2M329 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC96Q2M329 ACTBP11-201ENST00000436287 1126 ntBASIC17.63■□□□□ 0.41
CCDC96Q2M329 POM121L9P-203ENST00000441984 1285 ntBASIC17.63■□□□□ 0.41
CCDC96Q2M329 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms