Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Cbx3P23198 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cbx3P23198 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cbx3P23198 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cbx3P23198 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cbx3P23198 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cbx3P23198 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cbx3P23198 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cbx3P23198 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Cbx3P23198 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Cbx3P23198 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cbx3P23198 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cbx3P23198 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cbx3P23198 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cbx3P23198 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.96□□□□□ -0.65
Cbx3P23198 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.96□□□□□ -0.65
Cbx3P23198 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.96□□□□□ -0.65
Cbx3P23198 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 Gm13223-201ENSMUST00000118609 747 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Cbx3P23198 Mir7684-201ENSMUST00000183858 60 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 Gm38144-201ENSMUST00000192790 465 ntBASIC10.96□□□□□ -0.65
Cbx3P23198 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cbx3P23198 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cbx3P23198 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.96□□□□□ -0.66
Cbx3P23198 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cbx3P23198 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cbx3P23198 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cbx3P23198 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cbx3P23198 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.96□□□□□ -0.66
Cbx3P23198 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cbx3P23198 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.95□□□□□ -0.66
Cbx3P23198 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.95□□□□□ -0.66
Cbx3P23198 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cbx3P23198 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms