Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
MMP8P22894 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
MMP8P22894 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.88■□□□□ 0.13
MMP8P22894 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
MMP8P22894 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 AP001267.2-201ENST00000532619 2086 ntBASIC15.88■□□□□ 0.13
MMP8P22894 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
MMP8P22894 AC134312.5-201ENST00000568031 1313 ntBASIC15.88■□□□□ 0.13
MMP8P22894 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.88■□□□□ 0.13
MMP8P22894 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
MMP8P22894 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MMP8P22894 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP8P22894 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MMP8P22894 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP8P22894 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP8P22894 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP8P22894 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP8P22894 PTP4A1P2-201ENST00000546033 454 ntBASIC15.87■□□□□ 0.13
MMP8P22894 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.87■□□□□ 0.13
MMP8P22894 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.87■□□□□ 0.13
MMP8P22894 AC145423.3-201ENST00000615987 467 ntBASIC15.87■□□□□ 0.13
MMP8P22894 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 AC097359.2-201ENST00000604992 2389 ntBASIC15.87■□□□□ 0.13
MMP8P22894 INTS4P1-203ENST00000641008 3683 ntBASIC15.87■□□□□ 0.13
MMP8P22894 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 AL354702.1-201ENST00000442006 1960 ntBASIC15.87■□□□□ 0.13
MMP8P22894 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MMP8P22894 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MMP8P22894 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.87■□□□□ 0.13
MMP8P22894 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
MMP8P22894 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.86■□□□□ 0.13
MMP8P22894 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.86■□□□□ 0.13
MMP8P22894 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 AC003102.2-201ENST00000589195 1469 ntBASIC15.86■□□□□ 0.13
MMP8P22894 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
MMP8P22894 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
MMP8P22894 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.86■□□□□ 0.13
MMP8P22894 TLE1P1-201ENST00000422965 589 ntBASIC15.86■□□□□ 0.13
MMP8P22894 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.86■□□□□ 0.13
MMP8P22894 FO681548.1-201ENST00000455617 1132 ntBASIC15.86■□□□□ 0.13
MMP8P22894 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.86■□□□□ 0.13
MMP8P22894 RN7SL837P-201ENST00000463010 287 ntBASIC15.86■□□□□ 0.13
MMP8P22894 AC068587.3-201ENST00000526613 355 ntBASIC15.86■□□□□ 0.13
MMP8P22894 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 TDH-203ENST00000531764 1110 ntBASIC15.86■□□□□ 0.13
MMP8P22894 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
MMP8P22894 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP8P22894 AC027307.3-201ENST00000594262 1100 ntBASIC15.86■□□□□ 0.13
MMP8P22894 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP8P22894 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MMP8P22894 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms