Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LDB2O43679 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
LDB2O43679 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 BAATP1-201ENST00000412284 1225 ntBASIC15.13■□□□□ 0.01
LDB2O43679 AC012441.1-201ENST00000446669 685 ntBASIC15.13■□□□□ 0.01
LDB2O43679 GAPDHP21-201ENST00000450301 1010 ntBASIC15.13■□□□□ 0.01
LDB2O43679 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.13■□□□□ 0.01
LDB2O43679 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 AL596325.1-201ENST00000563991 1082 ntBASIC15.13■□□□□ 0.01
LDB2O43679 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.13■□□□□ 0.01
LDB2O43679 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LDB2O43679 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LDB2O43679 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
LDB2O43679 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LDB2O43679 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.12■□□□□ 0.01
LDB2O43679 RN7SL837P-201ENST00000463010 287 ntBASIC15.12■□□□□ 0.01
LDB2O43679 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.12■□□□□ 0.01
LDB2O43679 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.12■□□□□ 0.01
LDB2O43679 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LDB2O43679 AC004466.1-201ENST00000599515 1080 ntBASIC15.12■□□□□ 0.01
LDB2O43679 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LDB2O43679 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LDB2O43679 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LDB2O43679 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 AL513477.1-201ENST00000602865 2407 ntBASIC15.11■□□□□ 0.01
LDB2O43679 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.11■□□□□ 0.01
LDB2O43679 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 RN7SL752P-201ENST00000463779 287 ntBASIC15.11■□□□□ 0.01
LDB2O43679 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LDB2O43679 TDH-203ENST00000531764 1110 ntBASIC15.11■□□□□ 0.01
LDB2O43679 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
LDB2O43679 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LDB2O43679 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LDB2O43679 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms