Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN9O14815 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN9O14815 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CAPN9O14815 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CAPN9O14815 NUS1P3-201ENST00000423502 862 ntBASIC16.07■□□□□ 0.16
CAPN9O14815 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 INE1-201ENST00000456273 945 ntBASIC16.07■□□□□ 0.16
CAPN9O14815 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN9O14815 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN9O14815 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN9O14815 AC010319.3-201ENST00000597028 470 ntBASIC16.07■□□□□ 0.16
CAPN9O14815 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.07■□□□□ 0.16
CAPN9O14815 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.07■□□□□ 0.16
CAPN9O14815 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN9O14815 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CAPN9O14815 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN9O14815 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN9O14815 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN9O14815 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CAPN9O14815 AL512384.1-201ENST00000406683 331 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 NME2P1-201ENST00000426182 414 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 RN7SL837P-201ENST00000463010 287 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 AP001063.1-201ENST00000568332 529 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CAPN9O14815 AC106881.1-201ENST00000605849 3329 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN9O14815 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 AL359258.3-201ENST00000622910 2331 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 AC006486.2-201ENST00000624246 2199 ntBASIC16.06■□□□□ 0.16
CAPN9O14815 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN9O14815 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN9O14815 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN9O14815 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CAPN9O14815 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN9O14815 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN9O14815 AL158070.2-201ENST00000623713 1621 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms