Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC8.61□□□□□ -1.03
Trav8-1A0A075B641 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm11524-201ENSMUST00000119349 807 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm11978-201ENSMUST00000122315 466 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm10576-201ENSMUST00000191927 825 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm9063-201ENSMUST00000223299 582 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Mir339-201ENSMUST00000083659 96 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trav8-1A0A075B641 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm5303-201ENSMUST00000117943 1252 ntBASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm9522-201ENSMUST00000182394 926 ntBASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm27702-201ENSMUST00000184512 56 ntBASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav8-1A0A075B641 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 277.2 ms