Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 AC152010.1-201ENST00000415779 2006 ntBASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 AC004233.3-201ENST00000607794 1269 ntBASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 PRSS30P-206ENST00000641773 873 ntBASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HERPUD2Q9BSE4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 PIN1P1-201ENST00000412108 996 ntBASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.68■□□□□ 0.1
HERPUD2Q9BSE4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.67■□□□□ 0.1
HERPUD2Q9BSE4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
HERPUD2Q9BSE4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.67■□□□□ 0.1
HERPUD2Q9BSE4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERPUD2Q9BSE4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms