Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC015922.1-201ENST00000421102 1152 ntBASIC14.93□□□□□ -0.02
NPAS2Q99743 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.93□□□□□ -0.02
NPAS2Q99743 SPTLC1P1-201ENST00000447199 261 ntBASIC14.93□□□□□ -0.02
NPAS2Q99743 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS2Q99743 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NPAS2Q99743 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS2Q99743 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.93□□□□□ -0.02
NPAS2Q99743 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS2Q99743 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 HSPA7-201ENST00000445535 1927 ntBASIC14.93□□□□□ -0.02
NPAS2Q99743 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS2Q99743 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS2Q99743 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.93□□□□□ -0.02
NPAS2Q99743 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NPAS2Q99743 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPAS2Q99743 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPAS2Q99743 AP001267.2-201ENST00000532619 2086 ntBASIC14.93□□□□□ -0.02
NPAS2Q99743 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.92□□□□□ -0.02
NPAS2Q99743 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 AC136604.1-201ENST00000418535 575 ntBASIC14.92□□□□□ -0.02
NPAS2Q99743 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS2Q99743 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS2Q99743 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
NPAS2Q99743 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS2Q99743 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 KRT8P12-202ENST00000472924 1397 ntBASIC14.92□□□□□ -0.02
NPAS2Q99743 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 AC136759.1-202ENST00000530858 2194 ntBASIC14.92□□□□□ -0.02
NPAS2Q99743 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NPAS2Q99743 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPAS2Q99743 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.92□□□□□ -0.02
NPAS2Q99743 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPAS2Q99743 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPAS2Q99743 AC113367.3-201ENST00000508316 1912 ntBASIC14.92□□□□□ -0.02
NPAS2Q99743 AC010327.5-201ENST00000586923 3061 ntBASIC14.91□□□□□ -0.02
NPAS2Q99743 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.91□□□□□ -0.02
NPAS2Q99743 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NPAS2Q99743 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NPAS2Q99743 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPAS2Q99743 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPAS2Q99743 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms