Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm5070-201ENSMUST00000177599 862 ntBASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm25700-201ENSMUST00000177693 110 ntBASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smarcc2Q6PDG5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm14130-201ENSMUST00000118417 987 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm12164-201ENSMUST00000121695 551 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm26361-201ENSMUST00000158868 186 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm29199-201ENSMUST00000187766 775 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcc2Q6PDG5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcc2Q6PDG5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms