Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.72□□□□□ -0.69
Sf3b6P59708 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Gm43818-201ENSMUST00000200605 466 ntBASIC10.72□□□□□ -0.69
Sf3b6P59708 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.72□□□□□ -0.69
Sf3b6P59708 CT009754.4-201ENSMUST00000221430 565 ntBASIC10.72□□□□□ -0.69
Sf3b6P59708 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.72□□□□□ -0.69
Sf3b6P59708 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.72□□□□□ -0.69
Sf3b6P59708 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Gm13492-201ENSMUST00000119772 665 ntBASIC10.71□□□□□ -0.69
Sf3b6P59708 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.71□□□□□ -0.69
Sf3b6P59708 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.71□□□□□ -0.69
Sf3b6P59708 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.71□□□□□ -0.69
Sf3b6P59708 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.71□□□□□ -0.69
Sf3b6P59708 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sf3b6P59708 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sf3b6P59708 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.71□□□□□ -0.7
Sf3b6P59708 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sf3b6P59708 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.7□□□□□ -0.7
Sf3b6P59708 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm11425-201ENSMUST00000119608 498 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Mir1982-201ENSMUST00000157368 74 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms