Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
LBX1P52954 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LBX1P52954 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.65■□□□□ 0.26
LBX1P52954 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LBX1P52954 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LBX1P52954 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LBX1P52954 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LBX1P52954 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LBX1P52954 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
LBX1P52954 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.64■□□□□ 0.26
LBX1P52954 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
LBX1P52954 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LBX1P52954 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.64■□□□□ 0.25
LBX1P52954 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 MIR648-201ENST00000385046 94 ntBASIC16.64■□□□□ 0.25
LBX1P52954 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 RN7SL672P-201ENST00000474091 317 ntBASIC16.64■□□□□ 0.25
LBX1P52954 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC16.64■□□□□ 0.25
LBX1P52954 KRT18P37-201ENST00000520711 1282 ntBASIC16.64■□□□□ 0.25
LBX1P52954 MBP-230ENST00000528160 584 ntTSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 AC003686.1-201ENST00000550956 1034 ntBASIC16.64■□□□□ 0.25
LBX1P52954 ANKRD26P1-203ENST00000569528 966 ntBASIC16.64■□□□□ 0.25
LBX1P52954 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.64■□□□□ 0.25
LBX1P52954 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.64■□□□□ 0.25
LBX1P52954 AC021321.1-201ENST00000607397 1113 ntBASIC16.64■□□□□ 0.25
LBX1P52954 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LBX1P52954 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.64■□□□□ 0.25
LBX1P52954 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LBX1P52954 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
LBX1P52954 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.63■□□□□ 0.25
LBX1P52954 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LBX1P52954 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LBX1P52954 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.63■□□□□ 0.25
LBX1P52954 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.63■□□□□ 0.25
LBX1P52954 MIR611-201ENST00000384869 67 ntBASIC16.63■□□□□ 0.25
LBX1P52954 OR10N1P-201ENST00000392758 869 ntBASIC16.63■□□□□ 0.25
LBX1P52954 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.63■□□□□ 0.25
LBX1P52954 AC098934.1-203ENST00000442868 1262 ntBASIC16.63■□□□□ 0.25
LBX1P52954 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.63■□□□□ 0.25
LBX1P52954 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 RN7SL277P-201ENST00000481521 288 ntBASIC16.63■□□□□ 0.25
LBX1P52954 RN7SL564P-201ENST00000496309 250 ntBASIC16.63■□□□□ 0.25
LBX1P52954 AC147876.1-201ENST00000504408 322 ntBASIC16.63■□□□□ 0.25
LBX1P52954 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.63■□□□□ 0.25
LBX1P52954 RN7SL440P-201ENST00000577855 343 ntBASIC16.63■□□□□ 0.25
LBX1P52954 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.63■□□□□ 0.25
LBX1P52954 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.63■□□□□ 0.25
LBX1P52954 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LBX1P52954 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.63■□□□□ 0.25
LBX1P52954 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC16.63■□□□□ 0.25
LBX1P52954 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LBX1P52954 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.63■□□□□ 0.25
LBX1P52954 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms