Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 TTTY23B-201ENST00000442790 549 ntBASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 AL358472.5-202ENST00000641448 1267 ntBASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 AC003102.2-201ENST00000589195 1469 ntBASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 AC005912.2-201ENST00000619492 2400 ntBASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 AC005229.1-201ENST00000392885 409 ntBASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 AC015936.2-201ENST00000593177 259 ntBASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BLOC1S4Q9NUP1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 CLUHP2-201ENST00000426660 1303 ntBASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 RN7SKP230-201ENST00000365642 335 ntBASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 AC005225.4-201ENST00000557330 545 ntBASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 AC025279.2-201ENST00000569730 653 ntBASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 AP001267.2-201ENST00000532619 2086 ntBASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
BLOC1S4Q9NUP1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms