Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Q9CYI0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.41□□□□□ -0.26
Q9CYI0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Q9CYI0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Q9CYI0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.41□□□□□ -0.26
Q9CYI0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Gm22133-201ENSMUST00000102082 109 ntBASIC13.41□□□□□ -0.26
Q9CYI0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.41□□□□□ -0.26
Q9CYI0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Q9CYI0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.41□□□□□ -0.26
Q9CYI0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.41□□□□□ -0.26
Q9CYI0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Q9CYI0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Q9CYI0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Q9CYI0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Q9CYI0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Q9CYI0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Q9CYI0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.4□□□□□ -0.26
Q9CYI0 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.4□□□□□ -0.26
Q9CYI0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.4□□□□□ -0.26
Q9CYI0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.4□□□□□ -0.26
Q9CYI0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.4□□□□□ -0.26
Q9CYI0 Gm18038-201ENSMUST00000197900 485 ntBASIC13.4□□□□□ -0.26
Q9CYI0 Gm43947-201ENSMUST00000203019 959 ntBASIC13.4□□□□□ -0.26
Q9CYI0 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.4□□□□□ -0.26
Q9CYI0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Q9CYI0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Q9CYI0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Q9CYI0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Q9CYI0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Q9CYI0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.4□□□□□ -0.27
Q9CYI0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.39□□□□□ -0.27
Q9CYI0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Gm14263-201ENSMUST00000117955 746 ntBASIC13.39□□□□□ -0.27
Q9CYI0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.39□□□□□ -0.27
Q9CYI0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.39□□□□□ -0.27
Q9CYI0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Q9CYI0 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.39□□□□□ -0.27
Q9CYI0 Gm27390-201ENSMUST00000184516 176 ntBASIC13.39□□□□□ -0.27
Q9CYI0 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.39□□□□□ -0.27
Q9CYI0 Gm43962-201ENSMUST00000203898 190 ntBASIC13.39□□□□□ -0.27
Q9CYI0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.39□□□□□ -0.27
Q9CYI0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.39□□□□□ -0.27
Q9CYI0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Q9CYI0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Q9CYI0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Q9CYI0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Q9CYI0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Q9CYI0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Q9CYI0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Q9CYI0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q9CYI0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms