Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 KRT17P5-201ENST00000332088 839 ntBASIC12.98□□□□□ -0.33
USP9XQ93008 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.98□□□□□ -0.33
USP9XQ93008 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.98□□□□□ -0.33
USP9XQ93008 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.98□□□□□ -0.33
USP9XQ93008 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.98□□□□□ -0.33
USP9XQ93008 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.98□□□□□ -0.33
USP9XQ93008 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.98□□□□□ -0.33
USP9XQ93008 AC068867.1-201ENST00000559855 150 ntBASIC12.98□□□□□ -0.33
USP9XQ93008 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.98□□□□□ -0.33
USP9XQ93008 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.98□□□□□ -0.33
USP9XQ93008 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC12.98□□□□□ -0.33
USP9XQ93008 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
USP9XQ93008 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.98□□□□□ -0.33
USP9XQ93008 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.98□□□□□ -0.33
USP9XQ93008 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
USP9XQ93008 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.98□□□□□ -0.33
USP9XQ93008 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 AC124067.4-201ENST00000519691 2379 ntBASIC12.97□□□□□ -0.33
USP9XQ93008 MARK2P16-201ENST00000605714 1723 ntBASIC12.97□□□□□ -0.33
USP9XQ93008 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 AC114947.1-202ENST00000514136 344 ntBASIC12.97□□□□□ -0.33
USP9XQ93008 CTBP2P6-201ENST00000526402 1229 ntBASIC12.97□□□□□ -0.33
USP9XQ93008 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.97□□□□□ -0.33
USP9XQ93008 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.97□□□□□ -0.33
USP9XQ93008 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.97□□□□□ -0.33
USP9XQ93008 AC007326.1-201ENST00000604539 458 ntBASIC12.97□□□□□ -0.33
USP9XQ93008 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.97□□□□□ -0.33
USP9XQ93008 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
USP9XQ93008 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.97□□□□□ -0.33
USP9XQ93008 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
USP9XQ93008 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.97□□□□□ -0.33
USP9XQ93008 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.97□□□□□ -0.33
USP9XQ93008 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.97□□□□□ -0.33
USP9XQ93008 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.97□□□□□ -0.33
USP9XQ93008 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
USP9XQ93008 PCDHB19P-201ENST00000570871 2371 ntBASIC12.97□□□□□ -0.33
USP9XQ93008 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
USP9XQ93008 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 AL360270.3-201ENST00000609118 1348 ntBASIC12.96□□□□□ -0.33
USP9XQ93008 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
USP9XQ93008 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
USP9XQ93008 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.96□□□□□ -0.33
USP9XQ93008 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.96□□□□□ -0.33
USP9XQ93008 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.96□□□□□ -0.33
USP9XQ93008 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 AC005332.8-201ENST00000622750 2735 ntBASIC12.96□□□□□ -0.33
USP9XQ93008 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
USP9XQ93008 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
USP9XQ93008 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
USP9XQ93008 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.96□□□□□ -0.34
USP9XQ93008 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.96□□□□□ -0.34
USP9XQ93008 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.96□□□□□ -0.34
USP9XQ93008 RN7SL494P-201ENST00000461517 304 ntBASIC12.96□□□□□ -0.34
USP9XQ93008 AC140113.1-201ENST00000603467 169 ntBASIC12.96□□□□□ -0.34
USP9XQ93008 AC090510.3-201ENST00000615831 821 ntBASIC12.96□□□□□ -0.34
USP9XQ93008 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms