Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.91□□□□□ -0.5
VclQ64727 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.91□□□□□ -0.5
VclQ64727 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VclQ64727 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.91□□□□□ -0.5
VclQ64727 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.91□□□□□ -0.5
VclQ64727 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VclQ64727 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
VclQ64727 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VclQ64727 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
VclQ64727 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.9□□□□□ -0.5
VclQ64727 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.9□□□□□ -0.5
VclQ64727 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VclQ64727 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.9□□□□□ -0.5
VclQ64727 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.9□□□□□ -0.5
VclQ64727 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Rprl1-201ENSMUST00000158050 327 ntBASIC11.9□□□□□ -0.5
VclQ64727 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VclQ64727 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
VclQ64727 Gm29615-201ENSMUST00000185371 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28224-201ENSMUST00000186078 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm29001-201ENSMUST00000186177 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28292-201ENSMUST00000186593 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28101-201ENSMUST00000187608 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm29076-201ENSMUST00000187689 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28302-201ENSMUST00000187931 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28646-201ENSMUST00000188220 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28205-201ENSMUST00000189177 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm29032-201ENSMUST00000189797 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm28695-201ENSMUST00000190300 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm37448-201ENSMUST00000192795 697 ntBASIC11.9□□□□□ -0.5
VclQ64727 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm44262-201ENSMUST00000204969 372 ntBASIC11.9□□□□□ -0.5
VclQ64727 Gm45433-201ENSMUST00000209386 247 ntBASIC11.9□□□□□ -0.5
VclQ64727 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.9□□□□□ -0.5
VclQ64727 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.9□□□□□ -0.5
VclQ64727 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.9□□□□□ -0.5
VclQ64727 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VclQ64727 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
VclQ64727 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VclQ64727 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
VclQ64727 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
VclQ64727 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.9□□□□□ -0.51
VclQ64727 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VclQ64727 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
VclQ64727 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.89□□□□□ -0.51
VclQ64727 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VclQ64727 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms