Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AL354989.2-201ENST00000435838 1540 ntBASIC18.2■□□□□ 0.5
RFX7Q2KHR2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 KRT8P13-201ENST00000463294 1010 ntBASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AC004466.1-201ENST00000599515 1080 ntBASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AC073413.1-201ENST00000603927 732 ntBASIC18.2■□□□□ 0.5
RFX7Q2KHR2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 AC015818.8-201ENST00000587907 1519 ntBASIC18.2■□□□□ 0.5
RFX7Q2KHR2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX7Q2KHR2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 AL138725.1-201ENST00000407347 1314 ntBASIC18.19■□□□□ 0.5
RFX7Q2KHR2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 MIR663B-201ENST00000408361 115 ntBASIC18.19■□□□□ 0.5
RFX7Q2KHR2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 LINC00554-201ENST00000564841 3011 ntBASIC18.19■□□□□ 0.5
RFX7Q2KHR2 FAM45BP-202ENST00000592932 1624 ntBASIC18.19■□□□□ 0.5
RFX7Q2KHR2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 AC003102.2-201ENST00000589195 1469 ntBASIC18.19■□□□□ 0.5
RFX7Q2KHR2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX7Q2KHR2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 AC104306.2-201ENST00000451877 341 ntBASIC18.18■□□□□ 0.5
RFX7Q2KHR2 AC091804.1-201ENST00000486888 567 ntBASIC18.18■□□□□ 0.5
RFX7Q2KHR2 MESTP3-201ENST00000503460 968 ntBASIC18.18■□□□□ 0.5
RFX7Q2KHR2 AC106820.3-201ENST00000561653 397 ntBASIC18.18■□□□□ 0.5
RFX7Q2KHR2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 AC138696.2-201ENST00000607376 223 ntBASIC18.18■□□□□ 0.5
RFX7Q2KHR2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX7Q2KHR2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 BTBD6P1-201ENST00000412176 1267 ntBASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms