Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43cP86449 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43cP86449 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.13□□□□□ -0.31
Trim43cP86449 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.13□□□□□ -0.31
Trim43cP86449 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim43cP86449 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.13□□□□□ -0.31
Trim43cP86449 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43cP86449 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.13□□□□□ -0.31
Trim43cP86449 Gm7003-201ENSMUST00000195089 312 ntBASIC13.13□□□□□ -0.31
Trim43cP86449 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim43cP86449 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.13□□□□□ -0.31
Trim43cP86449 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43cP86449 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43cP86449 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim43cP86449 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim43cP86449 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43cP86449 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Gm26286-201ENSMUST00000104166 134 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Gm13996-201ENSMUST00000118456 430 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Gm14441-201ENSMUST00000121960 540 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Gm15276-201ENSMUST00000145953 498 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Gm9192-201ENSMUST00000183221 985 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim43cP86449 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim43cP86449 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43cP86449 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms