Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
NPIPB4C9JG80 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 AL354702.1-201ENST00000442006 1960 ntBASIC13.4□□□□□ -0.26
NPIPB4C9JG80 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 AC190387.1-201ENST00000551683 408 ntBASIC13.4□□□□□ -0.26
NPIPB4C9JG80 MIR4745-201ENST00000577608 62 ntBASIC13.4□□□□□ -0.26
NPIPB4C9JG80 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.4□□□□□ -0.26
NPIPB4C9JG80 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 BX640514.1-201ENST00000583223 1918 ntBASIC13.4□□□□□ -0.26
NPIPB4C9JG80 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NPIPB4C9JG80 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.27
NPIPB4C9JG80 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPB4C9JG80 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NPIPB4C9JG80 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 AC063926.3-201ENST00000624734 5658 ntBASIC13.39□□□□□ -0.27
NPIPB4C9JG80 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 FLJ16779-201ENST00000612722 7638 ntBASIC13.39□□□□□ -0.27
NPIPB4C9JG80 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 AL033527.5-201ENST00000641382 801 ntBASIC13.39□□□□□ -0.27
NPIPB4C9JG80 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 AC003102.2-201ENST00000589195 1469 ntBASIC13.39□□□□□ -0.27
NPIPB4C9JG80 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NPIPB4C9JG80 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms