Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm2383-201ENSMUST00000181461 807 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm26232-201ENSMUST00000083360 166 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf135Q9CWS1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Gm14999-201ENSMUST00000121039 624 ntBASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Gm13316-201ENSMUST00000140537 691 ntBASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf135Q9CWS1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf135Q9CWS1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms