Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sec61bQ9CQS8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sec61bQ9CQS8 Gm5466-201ENSMUST00000119395 1890 ntBASIC6.73□□□□□ -1.33
Sec61bQ9CQS8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC6.73□□□□□ -1.33
Sec61bQ9CQS8 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sec61bQ9CQS8 Gm43908-201ENSMUST00000205074 1472 ntBASIC6.73□□□□□ -1.33
Sec61bQ9CQS8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm25214-201ENSMUST00000104573 129 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm6382-201ENSMUST00000118873 942 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm13736-201ENSMUST00000119272 253 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm12201-201ENSMUST00000120657 1234 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm14999-201ENSMUST00000121039 624 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm22902-201ENSMUST00000158488 302 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm27341-201ENSMUST00000183570 106 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Mir6927-201ENSMUST00000184494 71 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm8856-201ENSMUST00000185254 1144 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Trdv3-201ENSMUST00000198551 309 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm18730-201ENSMUST00000218038 343 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 AC154305.4-201ENSMUST00000224520 614 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 AC123738.1-201ENSMUST00000224796 773 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sec61bQ9CQS8 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sec61bQ9CQS8 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sec61bQ9CQS8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sec61bQ9CQS8 AC140462.2-201ENSMUST00000225718 2433 ntBASIC6.71□□□□□ -1.33
Sec61bQ9CQS8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms