Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
HOXA1P49639 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 AL691432.1-201ENST00000596308 1422 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 AGAP7P-201ENST00000582299 2062 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 AGAP14-201ENST00000624701 2060 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 AL731571.1-201ENST00000617058 5428 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 BX640514.1-201ENST00000583223 1918 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
HOXA1P49639 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.73□□□□□ -0.37
HOXA1P49639 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 AL662844.1-201ENST00000546340 181 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
HOXA1P49639 RARRES2P8-201ENST00000566335 367 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.73□□□□□ -0.37
HOXA1P49639 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.73□□□□□ -0.37
HOXA1P49639 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.73□□□□□ -0.37
HOXA1P49639 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 AL031595.1-201ENST00000623969 4709 ntBASIC12.73□□□□□ -0.37
HOXA1P49639 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HOXA1P49639 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.73□□□□□ -0.37
HOXA1P49639 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
HOXA1P49639 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.72□□□□□ -0.37
HOXA1P49639 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.72□□□□□ -0.37
HOXA1P49639 AC104109.2-201ENST00000602919 1418 ntBASIC12.72□□□□□ -0.37
HOXA1P49639 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 DMBT1P1-203ENST00000636837 4628 ntBASIC12.72□□□□□ -0.37
HOXA1P49639 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HOXA1P49639 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 MRPL3P1-201ENST00000400109 1033 ntBASIC12.72□□□□□ -0.37
HOXA1P49639 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 AC007967.2-201ENST00000432613 625 ntBASIC12.72□□□□□ -0.37
HOXA1P49639 AC074386.1-202ENST00000463561 864 ntBASIC12.72□□□□□ -0.37
HOXA1P49639 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.72□□□□□ -0.37
HOXA1P49639 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.72□□□□□ -0.37
HOXA1P49639 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.72□□□□□ -0.37
HOXA1P49639 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.72□□□□□ -0.37
HOXA1P49639 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.72□□□□□ -0.37
HOXA1P49639 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.72□□□□□ -0.37
HOXA1P49639 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HOXA1P49639 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms