Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF3O95398 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF3O95398 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF3O95398 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 HNRNPA1P27-201ENST00000412087 955 ntBASIC22.18■■□□□ 1.14
RAPGEF3O95398 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 SRP14-204ENST00000558720 780 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF3O95398 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF3O95398 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RAPGEF3O95398 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 SALL4P5-201ENST00000419001 1760 ntBASIC22.17■■□□□ 1.14
RAPGEF3O95398 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 FRMD6-AS1-201ENST00000617151 2229 ntBASIC22.17■■□□□ 1.14
RAPGEF3O95398 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 CISD2-202ENST00000503643 808 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 AC131206.1-201ENST00000538078 1211 ntBASIC22.17■■□□□ 1.14
RAPGEF3O95398 MBP-238ENST00000580402 915 ntTSL 5 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC22.17■■□□□ 1.14
RAPGEF3O95398 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF3O95398 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 RPL18AP8-201ENST00000486071 528 ntBASIC22.16■■□□□ 1.14
RAPGEF3O95398 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AC226150.1-201ENST00000544259 466 ntBASIC22.16■■□□□ 1.14
RAPGEF3O95398 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 RPS5-204ENST00000598098 536 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 CICP13-201ENST00000422015 2789 ntBASIC22.16■■□□□ 1.14
RAPGEF3O95398 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AC023090.2-201ENST00000625182 2110 ntBASIC22.16■■□□□ 1.14
RAPGEF3O95398 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 ZNF436-AS1-201ENST00000335648 2547 ntBASIC22.16■■□□□ 1.14
RAPGEF3O95398 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF3O95398 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF3O95398 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF3O95398 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF3O95398 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF3O95398 CTBP2P8-201ENST00000422584 1330 ntBASIC22.15■■□□□ 1.14
RAPGEF3O95398 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 PCDHB19P-201ENST00000570871 2371 ntBASIC22.15■■□□□ 1.14
RAPGEF3O95398 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF3O95398 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPGEF3O95398 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms