Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 BTBD6P1-201ENST00000412176 1267 ntBASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 GPAA1P2-201ENST00000417923 928 ntBASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 AC099548.2-209ENST00000480264 625 ntBASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 FAM86HP-204ENST00000513466 959 ntBASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 FAM45BP-202ENST00000592932 1624 ntBASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 AC138969.2-201ENST00000532739 9932 ntBASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.43■□□□□ 0.22
SSX2IPQ9Y2D8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 AL136379.1-201ENST00000623471 2642 ntBASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 KLF2P2-201ENST00000416807 1039 ntBASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 AL596087.1-201ENST00000400979 1969 ntBASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX2IPQ9Y2D8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 TPM3P8-201ENST00000330554 643 ntBASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 MIR326-201ENST00000362220 95 ntBASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AC004066.1-201ENST00000502488 802 ntBASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AP001258.2-201ENST00000529891 490 ntBASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AC025181.2-201ENST00000606994 802 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms