Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS9D1Q9Y2B5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
VPS9D1Q9Y2B5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
VPS9D1Q9Y2B5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.26■□□□□ 0.03
VPS9D1Q9Y2B5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
VPS9D1Q9Y2B5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC007787.1-201ENST00000588095 1583 ntBASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MRPS18AP1-201ENST00000414458 589 ntBASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC026410.3-201ENST00000514280 936 ntBASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC055876.2-201ENST00000531834 546 ntBASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AL049840.4-201ENST00000602422 811 ntBASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AL137246.1-201ENST00000607072 977 ntBASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VPS9D1Q9Y2B5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 FGD5P1-202ENST00000614866 2498 ntBASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 SPDYE19P-201ENST00000338590 713 ntBASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VPS9D1Q9Y2B5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms