Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 KRT18P9-201ENST00000604826 1300 ntBASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AC010141.1-201ENST00000411585 623 ntBASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AC093752.3-201ENST00000567343 901 ntBASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 MIR3180-2-201ENST00000581748 88 ntBASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AC004466.1-201ENST00000599515 1080 ntBASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC168Q8NDH2 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AP000358.1-201ENST00000456260 156 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 MRPL37P1-201ENST00000592451 1337 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ME2P1-201ENST00000426028 1970 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ALOX12P2-203ENST00000570921 1945 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 HLA-DPA2-205ENST00000433582 733 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC004066.1-201ENST00000502488 802 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 AC005332.8-201ENST00000622750 2735 ntBASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC168Q8NDH2 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms