Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 AL035414.1-201ENST00000451327 857 ntBASIC18.03■□□□□ 0.48
SLX4Q8IY92 DPY19L2P5-201ENST00000456300 331 ntBASIC18.03■□□□□ 0.48
SLX4Q8IY92 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 AC003686.1-201ENST00000550956 1034 ntBASIC18.03■□□□□ 0.48
SLX4Q8IY92 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.03■□□□□ 0.48
SLX4Q8IY92 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.03■□□□□ 0.48
SLX4Q8IY92 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLX4Q8IY92 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.02■□□□□ 0.48
SLX4Q8IY92 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.02■□□□□ 0.48
SLX4Q8IY92 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 AC007952.4-201ENST00000573866 637 ntBASIC18.02■□□□□ 0.48
SLX4Q8IY92 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.02■□□□□ 0.48
SLX4Q8IY92 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.02■□□□□ 0.48
SLX4Q8IY92 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLX4Q8IY92 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.02■□□□□ 0.48
SLX4Q8IY92 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.02■□□□□ 0.48
SLX4Q8IY92 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.02■□□□□ 0.48
SLX4Q8IY92 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLX4Q8IY92 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.02■□□□□ 0.47
SLX4Q8IY92 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.02■□□□□ 0.47
SLX4Q8IY92 ST13P19-201ENST00000442505 1124 ntBASIC18.02■□□□□ 0.47
SLX4Q8IY92 RNA5SP417-201ENST00000516459 108 ntBASIC18.02■□□□□ 0.47
SLX4Q8IY92 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.02■□□□□ 0.47
SLX4Q8IY92 AL118516.1-201ENST00000564152 670 ntBASIC18.02■□□□□ 0.47
SLX4Q8IY92 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.02■□□□□ 0.47
SLX4Q8IY92 AC244250.3-201ENST00000620749 366 ntBASIC18.02■□□□□ 0.47
SLX4Q8IY92 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.02■□□□□ 0.47
SLX4Q8IY92 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.02■□□□□ 0.47
SLX4Q8IY92 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLX4Q8IY92 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLX4Q8IY92 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLX4Q8IY92 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLX4Q8IY92 KRT8P28-201ENST00000433288 1390 ntBASIC18.02■□□□□ 0.47
SLX4Q8IY92 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 AL513523.2-202ENST00000427283 2040 ntBASIC18.01■□□□□ 0.47
SLX4Q8IY92 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 RN7SL470P-201ENST00000583069 259 ntBASIC18.01■□□□□ 0.47
SLX4Q8IY92 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 AC011247.3-201ENST00000603297 438 ntBASIC18.01■□□□□ 0.47
SLX4Q8IY92 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.01■□□□□ 0.47
SLX4Q8IY92 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLX4Q8IY92 DKFZP434H168-201ENST00000567381 1905 ntBASIC18■□□□□ 0.47
SLX4Q8IY92 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms