Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm43186-201ENSMUST00000198130 824 ntBASIC10.68□□□□□ -0.7
NgfP01139 Gm44980-201ENSMUST00000205826 314 ntBASIC10.68□□□□□ -0.7
NgfP01139 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.68□□□□□ -0.7
NgfP01139 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.68□□□□□ -0.7
NgfP01139 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.68□□□□□ -0.7
NgfP01139 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.68□□□□□ -0.7
NgfP01139 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
NgfP01139 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.68□□□□□ -0.7
NgfP01139 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.68□□□□□ -0.7
NgfP01139 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
NgfP01139 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
NgfP01139 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.68□□□□□ -0.7
NgfP01139 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
NgfP01139 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
NgfP01139 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.67□□□□□ -0.7
NgfP01139 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.67□□□□□ -0.7
NgfP01139 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.67□□□□□ -0.7
NgfP01139 Gm27910-201ENSMUST00000185004 107 ntBASIC10.67□□□□□ -0.7
NgfP01139 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Gm37299-201ENSMUST00000193951 826 ntBASIC10.67□□□□□ -0.7
NgfP01139 Gm44506-201ENSMUST00000206278 965 ntBASIC10.67□□□□□ -0.7
NgfP01139 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.67□□□□□ -0.7
NgfP01139 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.67□□□□□ -0.7
NgfP01139 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
NgfP01139 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.67□□□□□ -0.7
NgfP01139 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
NgfP01139 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
NgfP01139 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.66□□□□□ -0.7
NgfP01139 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.66□□□□□ -0.7
NgfP01139 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.66□□□□□ -0.7
NgfP01139 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Gm11451-201ENSMUST00000118946 630 ntBASIC10.66□□□□□ -0.7
NgfP01139 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.66□□□□□ -0.7
NgfP01139 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.66□□□□□ -0.7
NgfP01139 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
NgfP01139 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Gm4654-201ENSMUST00000183305 982 ntBASIC10.66□□□□□ -0.7
NgfP01139 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.66□□□□□ -0.7
NgfP01139 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NgfP01139 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.66□□□□□ -0.7
NgfP01139 Gm43058-201ENSMUST00000197645 625 ntBASIC10.66□□□□□ -0.7
NgfP01139 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.66□□□□□ -0.7
NgfP01139 Gm6108-201ENSMUST00000208365 367 ntBASIC10.66□□□□□ -0.7
NgfP01139 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.66□□□□□ -0.7
NgfP01139 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.66□□□□□ -0.7
NgfP01139 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms