Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC16.03■□□□□ 0.16
Cps1Q8C196 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cps1Q8C196 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cps1Q8C196 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cps1Q8C196 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Cps1Q8C196 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Cps1Q8C196 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC16.02■□□□□ 0.16
Cps1Q8C196 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cps1Q8C196 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC16.02■□□□□ 0.15
Cps1Q8C196 Gm11578-201ENSMUST00000118530 459 ntBASIC16.02■□□□□ 0.15
Cps1Q8C196 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC16.02■□□□□ 0.15
Cps1Q8C196 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC16.02■□□□□ 0.15
Cps1Q8C196 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.02■□□□□ 0.15
Cps1Q8C196 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Gm6390-201ENSMUST00000215034 589 ntBASIC16.02■□□□□ 0.15
Cps1Q8C196 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cps1Q8C196 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cps1Q8C196 Gm8522-201ENSMUST00000118416 1929 ntBASIC16.01■□□□□ 0.15
Cps1Q8C196 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.01■□□□□ 0.15
Cps1Q8C196 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cps1Q8C196 AC158392.3-201ENSMUST00000224271 1284 ntBASIC16.01■□□□□ 0.15
Cps1Q8C196 AC130477.1-201ENSMUST00000226982 420 ntBASIC16.01■□□□□ 0.15
Cps1Q8C196 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC16.01■□□□□ 0.15
Cps1Q8C196 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cps1Q8C196 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cps1Q8C196 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cps1Q8C196 Gm13019-201ENSMUST00000120000 276 ntBASIC16■□□□□ 0.15
Cps1Q8C196 Gm5257-201ENSMUST00000121823 790 ntBASIC16■□□□□ 0.15
Cps1Q8C196 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC16■□□□□ 0.15
Cps1Q8C196 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16■□□□□ 0.15
Cps1Q8C196 Gm44647-201ENSMUST00000207402 428 ntBASIC16■□□□□ 0.15
Cps1Q8C196 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC16■□□□□ 0.15
Cps1Q8C196 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC16■□□□□ 0.15
Cps1Q8C196 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Cps1Q8C196 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cps1Q8C196 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cps1Q8C196 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cps1Q8C196 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cps1Q8C196 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Cps1Q8C196 Gm13445-201ENSMUST00000121664 307 ntBASIC15.99■□□□□ 0.15
Cps1Q8C196 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cps1Q8C196 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cps1Q8C196 Gm7719-201ENSMUST00000182374 975 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms