Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC103798.2-201ENST00000624292 632 ntBASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNFT1Q5M7Z0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 POM121L10P-201ENST00000436994 1285 ntBASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 FTLP10-202ENST00000505798 471 ntBASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 AC005730.2-201ENST00000564549 1184 ntBASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 MIR4683-201ENST00000579659 81 ntBASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 AL451050.2-201ENST00000606967 682 ntBASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
RNFT1Q5M7Z0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC020658.6-201ENST00000623564 1870 ntBASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 INE2-201ENST00000630399 1874 ntBASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC091804.1-201ENST00000486888 567 ntBASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 HIST2H2BC-201ENST00000498492 580 ntBASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC244452.3-201ENST00000636814 210 ntBASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC068587.10-201ENST00000641210 219 ntBASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.66□□□□□ -0.22
RNFT1Q5M7Z0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms