Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01643 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
P01643 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.65□□□□□ -0.87
P01643 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01643 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
P01643 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.65□□□□□ -0.87
P01643 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.65□□□□□ -0.87
P01643 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.65□□□□□ -0.87
P01643 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.64□□□□□ -0.87
P01643 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
P01643 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
P01643 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.64□□□□□ -0.87
P01643 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.64□□□□□ -0.87
P01643 Gm26286-201ENSMUST00000104166 134 ntBASIC9.64□□□□□ -0.87
P01643 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Gm12164-201ENSMUST00000121695 551 ntBASIC9.64□□□□□ -0.87
P01643 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.64□□□□□ -0.87
P01643 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.64□□□□□ -0.87
P01643 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.64□□□□□ -0.87
P01643 Gm22334-201ENSMUST00000158070 133 ntBASIC9.64□□□□□ -0.87
P01643 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.64□□□□□ -0.87
P01643 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.64□□□□□ -0.87
P01643 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.64□□□□□ -0.87
P01643 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.64□□□□□ -0.87
P01643 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Gm8343-201ENSMUST00000182705 994 ntBASIC9.64□□□□□ -0.87
P01643 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.64□□□□□ -0.87
P01643 Gm4034-201ENSMUST00000187674 480 ntBASIC9.64□□□□□ -0.87
P01643 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.64□□□□□ -0.87
P01643 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.64□□□□□ -0.87
P01643 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
P01643 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.64□□□□□ -0.87
P01643 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.64□□□□□ -0.87
P01643 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.64□□□□□ -0.87
P01643 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01643 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
P01643 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
P01643 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
P01643 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01643 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.64□□□□□ -0.87
P01643 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01643 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P01643 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.63□□□□□ -0.87
P01643 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.63□□□□□ -0.87
P01643 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
P01643 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P01643 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P01643 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.63□□□□□ -0.87
P01643 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01643 Gm11509-201ENSMUST00000117358 325 ntBASIC9.63□□□□□ -0.87
P01643 Gm14247-201ENSMUST00000120950 237 ntBASIC9.63□□□□□ -0.87
P01643 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms