Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5-4A0A075B652 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm8018-201ENSMUST00000173536 789 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm6222-202ENSMUST00000182143 629 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm27243-201ENSMUST00000183964 521 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm44405-201ENSMUST00000198952 126 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm45925-201ENSMUST00000218882 744 ntBASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav5-4A0A075B652 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5-4A0A075B652 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav5-4A0A075B652 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms