Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AC079316.1-201ENST00000548397 411 ntBASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AL583810.1-201ENST00000553344 1045 ntBASIC14.37□□□□□ -0.11
CTSFQ9UBX1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTSFQ9UBX1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 HLA-K-203ENST00000430151 1046 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 EIF3FP3-201ENST00000434851 1086 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC092658.1-201ENST00000505836 891 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 RNA5SP486-201ENST00000515961 83 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC009542.2-202ENST00000619004 1067 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC132938.4-201ENST00000623835 848 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 REXO1L5P-201ENST00000622260 2098 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AL157414.3-201ENST00000624276 1954 ntBASIC14.36□□□□□ -0.11
CTSFQ9UBX1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTSFQ9UBX1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms