Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 LINC00528-201ENST00000600723 2160 ntBASIC12.62□□□□□ -0.39
CCL3L1P16619 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 REXO1L5P-201ENST00000622260 2098 ntBASIC12.61□□□□□ -0.39
CCL3L1P16619 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CCL3L1P16619 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL3L1P16619 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 INE1-201ENST00000456273 945 ntBASIC12.61□□□□□ -0.39
CCL3L1P16619 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL3L1P16619 RN7SL837P-201ENST00000463010 287 ntBASIC12.61□□□□□ -0.39
CCL3L1P16619 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.61□□□□□ -0.39
CCL3L1P16619 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
CCL3L1P16619 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.61□□□□□ -0.39
CCL3L1P16619 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 AC010319.3-201ENST00000597028 470 ntBASIC12.61□□□□□ -0.39
CCL3L1P16619 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.61□□□□□ -0.39
CCL3L1P16619 AL358472.5-202ENST00000641448 1267 ntBASIC12.61□□□□□ -0.39
CCL3L1P16619 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCL3L1P16619 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3L1P16619 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCL3L1P16619 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
CCL3L1P16619 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CCL3L1P16619 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CCL3L1P16619 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCL3L1P16619 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms