Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 HLA-J-204ENST00000495278 958 ntBASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AC009779.1-201ENST00000551138 283 ntBASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 MIR4754-201ENST00000582477 89 ntBASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 MIR4750-201ENST00000584564 56 ntBASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC2Q9Y5Z7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 CICP11-201ENST00000434745 2827 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AC026316.1-201ENST00000398900 414 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AC073150.1-201ENST00000450406 1084 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AC132192.2-201ENST00000596206 1147 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AC103691.2-201ENST00000618824 433 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AL359258.3-201ENST00000622910 2331 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC2Q9Y5Z7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HCFC2Q9Y5Z7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms