Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 BAATP1-201ENST00000412284 1225 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC114812.1-204ENST00000449669 728 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC008735.3-201ENST00000596646 500 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC134312.5-201ENST00000568031 1313 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 KRT8P44-201ENST00000441609 1350 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AL158070.2-201ENST00000623713 1621 ntBASIC13.57□□□□□ -0.24
APH1AQ96BI3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC012508.2-201ENST00000567613 1472 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC104457.1-201ENST00000401024 814 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 TMEM14DP-201ENST00000422205 345 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 KRT43P-201ENST00000434019 910 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC012441.1-201ENST00000446669 685 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC022137.2-201ENST00000503482 481 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC233724.13-201ENST00000598383 410 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 RPSAP52-203ENST00000622976 1023 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC023024.2-201ENST00000623561 1993 ntBASIC13.56□□□□□ -0.24
APH1AQ96BI3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.56□□□□□ -0.24
APH1AQ96BI3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
APH1AQ96BI3 AC022532.1-201ENST00000624563 1728 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms