Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLCN2P51788 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.9□□□□□ -0.02
CLCN2P51788 AC117489.1-201ENST00000625169 3217 ntBASIC14.9□□□□□ -0.02
CLCN2P51788 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLCN2P51788 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.9□□□□□ -0.02
CLCN2P51788 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 FAM207CP-201ENST00000443486 507 ntBASIC14.9□□□□□ -0.02
CLCN2P51788 AC009477.1-201ENST00000452936 217 ntBASIC14.9□□□□□ -0.02
CLCN2P51788 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLCN2P51788 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.9□□□□□ -0.02
CLCN2P51788 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.9□□□□□ -0.02
CLCN2P51788 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.9□□□□□ -0.02
CLCN2P51788 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.9□□□□□ -0.02
CLCN2P51788 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 AL844908.2-201ENST00000609461 460 ntBASIC14.9□□□□□ -0.02
CLCN2P51788 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.9□□□□□ -0.02
CLCN2P51788 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.9□□□□□ -0.02
CLCN2P51788 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.9□□□□□ -0.02
CLCN2P51788 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLCN2P51788 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLCN2P51788 BNIP3P1-202ENST00000550043 1585 ntBASIC14.9□□□□□ -0.02
CLCN2P51788 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.89□□□□□ -0.03
CLCN2P51788 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.89□□□□□ -0.03
CLCN2P51788 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLCN2P51788 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLCN2P51788 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLCN2P51788 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLCN2P51788 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 AC073869.1-201ENST00000415574 2762 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.89□□□□□ -0.03
CLCN2P51788 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 UGT1A2P-201ENST00000454886 866 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.89□□□□□ -0.03
CLCN2P51788 ZNF890P-202ENST00000530367 1156 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 AL512361.1-201ENST00000554200 418 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.89□□□□□ -0.03
CLCN2P51788 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.89□□□□□ -0.03
CLCN2P51788 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 AC009118.2-201ENST00000613275 655 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.89□□□□□ -0.03
CLCN2P51788 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.89□□□□□ -0.03
CLCN2P51788 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.89□□□□□ -0.03
CLCN2P51788 AC027601.5-201ENST00000624065 2482 ntBASIC14.89□□□□□ -0.03
CLCN2P51788 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CLCN2P51788 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLCN2P51788 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms