Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RxrbP28704 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RxrbP28704 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RxrbP28704 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RxrbP28704 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
RxrbP28704 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.24□□□□□ -0.45
RxrbP28704 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Gm12203-201ENSMUST00000118235 598 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Gm12209-201ENSMUST00000120089 596 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.24□□□□□ -0.45
RxrbP28704 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RxrbP28704 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.24□□□□□ -0.45
RxrbP28704 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RxrbP28704 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.24□□□□□ -0.45
RxrbP28704 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.23□□□□□ -0.45
RxrbP28704 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.23□□□□□ -0.45
RxrbP28704 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.23□□□□□ -0.45
RxrbP28704 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.23□□□□□ -0.45
RxrbP28704 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.23□□□□□ -0.45
RxrbP28704 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.23□□□□□ -0.45
RxrbP28704 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.23□□□□□ -0.45
RxrbP28704 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.23□□□□□ -0.45
RxrbP28704 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.23□□□□□ -0.45
RxrbP28704 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Gm24526-201ENSMUST00000082921 158 ntBASIC12.23□□□□□ -0.45
RxrbP28704 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.23□□□□□ -0.45
RxrbP28704 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RxrbP28704 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
RxrbP28704 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
RxrbP28704 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.23□□□□□ -0.45
RxrbP28704 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
RxrbP28704 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RxrbP28704 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
RxrbP28704 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.22□□□□□ -0.45
RxrbP28704 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms