Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 AC131212.3-201ENST00000624087 4219 ntBASIC18.34■□□□□ 0.53
NCLP19338 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCLP19338 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NCLP19338 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 AL139400.1-201ENST00000366220 510 ntBASIC18.34■□□□□ 0.53
NCLP19338 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NCLP19338 AL645939.2-201ENST00000427340 991 ntBASIC18.34■□□□□ 0.53
NCLP19338 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.34■□□□□ 0.53
NCLP19338 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.34■□□□□ 0.53
NCLP19338 AC105233.2-201ENST00000523697 349 ntBASIC18.34■□□□□ 0.53
NCLP19338 AF228730.5-201ENST00000530288 346 ntBASIC18.34■□□□□ 0.53
NCLP19338 RFPL4AP1-201ENST00000530883 850 ntBASIC18.34■□□□□ 0.53
NCLP19338 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.34■□□□□ 0.53
NCLP19338 RARRES2P8-201ENST00000566335 367 ntBASIC18.34■□□□□ 0.53
NCLP19338 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.34■□□□□ 0.53
NCLP19338 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.34■□□□□ 0.53
NCLP19338 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCLP19338 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NCLP19338 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NCLP19338 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.33■□□□□ 0.53
NCLP19338 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.33■□□□□ 0.53
NCLP19338 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.33■□□□□ 0.53
NCLP19338 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCLP19338 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.33■□□□□ 0.52
NCLP19338 TIMM8BP1-201ENST00000452384 211 ntBASIC18.33■□□□□ 0.52
NCLP19338 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NCLP19338 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.33■□□□□ 0.52
NCLP19338 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NCLP19338 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC18.33■□□□□ 0.52
NCLP19338 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 FOXO1B-201ENST00000504678 1527 ntBASIC18.33■□□□□ 0.52
NCLP19338 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NCLP19338 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NCLP19338 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCLP19338 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.32■□□□□ 0.52
NCLP19338 AL136982.4-201ENST00000437689 1740 ntBASIC18.32■□□□□ 0.52
NCLP19338 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.32■□□□□ 0.52
NCLP19338 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.32■□□□□ 0.52
NCLP19338 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.32■□□□□ 0.52
NCLP19338 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.32■□□□□ 0.52
NCLP19338 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.32■□□□□ 0.52
NCLP19338 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.32■□□□□ 0.52
NCLP19338 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.32■□□□□ 0.52
NCLP19338 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.32■□□□□ 0.52
NCLP19338 KRT8P48-201ENST00000515599 1220 ntBASIC18.32■□□□□ 0.52
NCLP19338 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.32■□□□□ 0.52
NCLP19338 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms