Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TO15178 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.12□□□□□ -0.15
TO15178 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TO15178 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
TO15178 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TO15178 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 KRT8P14-201ENST00000414254 1442 ntBASIC14.11□□□□□ -0.15
TO15178 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.11□□□□□ -0.15
TO15178 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 AC007389.4-201ENST00000454674 793 ntBASIC14.11□□□□□ -0.15
TO15178 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.11□□□□□ -0.15
TO15178 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.11□□□□□ -0.15
TO15178 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TO15178 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 MIR5189-201ENST00000577370 114 ntBASIC14.11□□□□□ -0.15
TO15178 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.11□□□□□ -0.15
TO15178 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.11□□□□□ -0.15
TO15178 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 AC010319.3-201ENST00000597028 470 ntBASIC14.11□□□□□ -0.15
TO15178 AL603764.1-201ENST00000636452 321 ntBASIC14.11□□□□□ -0.15
TO15178 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TO15178 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 ZBED1P1-201ENST00000502364 1930 ntBASIC14.11□□□□□ -0.15
TO15178 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.11□□□□□ -0.15
TO15178 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TO15178 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TO15178 CICP14-201ENST00000629111 2732 ntBASIC14.11□□□□□ -0.15
TO15178 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.11□□□□□ -0.15
TO15178 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TO15178 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TO15178 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TO15178 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.1□□□□□ -0.15
TO15178 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.1□□□□□ -0.15
TO15178 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
TO15178 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.1□□□□□ -0.15
TO15178 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.1□□□□□ -0.15
TO15178 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.1□□□□□ -0.15
TO15178 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.1□□□□□ -0.15
TO15178 AL512384.1-201ENST00000406683 331 ntBASIC14.1□□□□□ -0.15
TO15178 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.1□□□□□ -0.15
TO15178 KLF2P2-201ENST00000416807 1039 ntBASIC14.1□□□□□ -0.15
TO15178 HLA-K-203ENST00000430151 1046 ntBASIC14.1□□□□□ -0.15
TO15178 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TO15178 INE1-201ENST00000456273 945 ntBASIC14.1□□□□□ -0.15
TO15178 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TO15178 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TO15178 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.1□□□□□ -0.15
TO15178 AC015936.2-201ENST00000593177 259 ntBASIC14.1□□□□□ -0.15
TO15178 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.1□□□□□ -0.15
TO15178 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.1□□□□□ -0.15
TO15178 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.1□□□□□ -0.15
TO15178 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms