Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Gm23595-201ENSMUST00000104306 130 ntBASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Gm13981-201ENSMUST00000122360 447 ntBASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Gm9081-201ENSMUST00000182346 991 ntBASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Gm43249-201ENSMUST00000200464 458 ntBASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.91□□□□□ -0.66
Sptbn4E9PX29 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm38103-201ENSMUST00000191707 864 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm26670-202ENSMUST00000226862 340 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm25562-201ENSMUST00000104608 133 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm13039-201ENSMUST00000118638 794 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm8342-201ENSMUST00000209839 757 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Gm7082-201ENSMUST00000209880 969 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sptbn4E9PX29 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sptbn4E9PX29 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sptbn4E9PX29 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sptbn4E9PX29 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sptbn4E9PX29 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sptbn4E9PX29 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Gm15626-201ENSMUST00000117478 868 ntBASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Gm6108-201ENSMUST00000208365 367 ntBASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sptbn4E9PX29 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms