Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 AL645937.2-201ENST00000396808 931 ntBASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 BAATP1-201ENST00000412284 1225 ntBASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 PRSS30P-206ENST00000641773 873 ntBASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.44■□□□□ 0.06
PCDHGC4Q9Y5F7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AL360270.3-201ENST00000609118 1348 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC063926.3-201ENST00000624734 5658 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AL139094.1-201ENST00000405549 1188 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 KLF2P2-201ENST00000416807 1039 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC012441.1-201ENST00000446669 685 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC022137.2-201ENST00000503482 481 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC068587.3-201ENST00000526613 355 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SLC25A47P1-201ENST00000531577 414 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 WASH3P-207ENST00000560956 1394 ntBASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGC4Q9Y5F7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AGAP7P-201ENST00000582299 2062 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 AGAP14-201ENST00000624701 2060 ntBASIC15.42■□□□□ 0.06
PCDHGC4Q9Y5F7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms