Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 MIR6787-201ENST00000616675 61 ntBASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 ENPP7P14-201ENST00000621765 1040 ntBASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTDP1Q9Y5B0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AC020907.1-201ENST00000616460 1350 ntBASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 KRT8P14-201ENST00000414254 1442 ntBASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AC022616.1-201ENST00000518688 554 ntBASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AL645728.2-202ENST00000641679 227 ntBASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 AL133338.1-201ENST00000565695 1517 ntBASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTDP1Q9Y5B0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 HOMER2P2-201ENST00000451621 847 ntBASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AC099548.2-209ENST00000480264 625 ntBASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AL118558.3-201ENST00000607414 1079 ntBASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AC244093.1-201ENST00000610837 814 ntBASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms