Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL133267.1-201ENST00000398220 340 ntBASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AC079316.1-201ENST00000548397 411 ntBASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 RHOXF1P1-202ENST00000635473 501 ntBASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AC106881.1-201ENST00000605849 3329 ntBASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AC011477.6-201ENST00000604980 1927 ntBASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 AL009178.2-201ENST00000597278 2719 ntBASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC6Q9UBN7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 YBX1P6-201ENST00000442962 1002 ntBASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AC010328.2-201ENST00000597698 1111 ntBASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.32■□□□□ 0.36
HDAC6Q9UBN7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 AL133338.1-201ENST00000565695 1517 ntBASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 C2orf27AP3-201ENST00000434123 579 ntBASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 MIR4313-201ENST00000580760 101 ntBASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 AL354718.3-201ENST00000616414 581 ntBASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 AC009542.2-202ENST00000619004 1067 ntBASIC17.31■□□□□ 0.36
HDAC6Q9UBN7 CR382287.1-201ENST00000623954 586 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms