Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 AL450472.2-201ENST00000603663 1156 ntBASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 AC134312.5-201ENST00000568031 1313 ntBASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC155Q8N6L0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AC092933.1-201ENST00000393644 945 ntBASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AC010328.2-201ENST00000597698 1111 ntBASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC155Q8N6L0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 FAM45BP-202ENST00000592932 1624 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AC136604.1-201ENST00000418535 575 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 KRT18P64-201ENST00000434946 1219 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 KRT18P43-201ENST00000469825 1281 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 FTH1P14-201ENST00000482930 551 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 CLUHP6-201ENST00000580789 941 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 GPR182-203ENST00000622922 591 ntBASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC155Q8N6L0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms