Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AL645933.1-201ENST00000440087 609 ntBASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 CICP12-201ENST00000455801 843 ntBASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 MIR3188-201ENST00000583494 85 ntBASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AC012073.1-201ENST00000606114 1108 ntBASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 AP003680.1-201ENST00000598970 3660 ntBASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C9orf50Q5SZB4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 RNA5SP359-201ENST00000364838 113 ntBASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 AC114947.1-202ENST00000514136 344 ntBASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 AC133540.1-201ENST00000620845 1019 ntBASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C9orf50Q5SZB4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 PGAM1P12-201ENST00000505622 748 ntBASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 AC055811.3-201ENST00000584952 686 ntBASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 AC027601.3-201ENST00000622907 509 ntBASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 AC011471.3-201ENST00000623576 402 ntBASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
C9orf50Q5SZB4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C9orf50Q5SZB4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms