Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCNKO75909 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 AC005521.1-201ENST00000393351 872 ntBASIC13.33□□□□□ -0.28
CCNKO75909 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNKO75909 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 AL020989.1-201ENST00000422979 469 ntBASIC13.33□□□□□ -0.28
CCNKO75909 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNKO75909 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNKO75909 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.33□□□□□ -0.28
CCNKO75909 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.33□□□□□ -0.28
CCNKO75909 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCNKO75909 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCNKO75909 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.33□□□□□ -0.28
CCNKO75909 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCNKO75909 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCNKO75909 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 AP001282.1-201ENST00000531301 1499 ntBASIC13.32□□□□□ -0.28
CCNKO75909 AP001972.5-201ENST00000624624 2338 ntBASIC13.32□□□□□ -0.28
CCNKO75909 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCNKO75909 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCNKO75909 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.32□□□□□ -0.28
CCNKO75909 AC246785.2-201ENST00000432512 513 ntBASIC13.32□□□□□ -0.28
CCNKO75909 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.32□□□□□ -0.28
CCNKO75909 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.32□□□□□ -0.28
CCNKO75909 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 AC091167.2-201ENST00000579581 588 ntBASIC13.32□□□□□ -0.28
CCNKO75909 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
CCNKO75909 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.32□□□□□ -0.28
CCNKO75909 FAM90A12P-201ENST00000519497 2375 ntBASIC13.32□□□□□ -0.28
CCNKO75909 FAM90A24P-201ENST00000520792 2369 ntBASIC13.32□□□□□ -0.28
CCNKO75909 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
CCNKO75909 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.32□□□□□ -0.28
CCNKO75909 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.32□□□□□ -0.28
CCNKO75909 AC055811.4-201ENST00000624039 1754 ntBASIC13.32□□□□□ -0.28
CCNKO75909 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCNKO75909 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms