Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.64■□□□□ 0.41
Col13a1Q9R1N9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Mir7075-201ENSMUST00000184187 82 ntBASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Gm43137-201ENSMUST00000198052 594 ntBASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col13a1Q9R1N9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col13a1Q9R1N9 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col13a1Q9R1N9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col13a1Q9R1N9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col13a1Q9R1N9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col13a1Q9R1N9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col13a1Q9R1N9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col13a1Q9R1N9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col13a1Q9R1N9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col13a1Q9R1N9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col13a1Q9R1N9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.58■□□□□ 0.4
Col13a1Q9R1N9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col13a1Q9R1N9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
Col13a1Q9R1N9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col13a1Q9R1N9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col13a1Q9R1N9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col13a1Q9R1N9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms