Protein–RNA interactions for Protein: Q9QYK7

Rnf11, RING finger protein 11, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf11Q9QYK7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf11Q9QYK7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf11Q9QYK7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf11Q9QYK7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf11Q9QYK7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf11Q9QYK7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.24■□□□□ 0.83
Rnf11Q9QYK7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Rnf11Q9QYK7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf11Q9QYK7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf11Q9QYK7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf11Q9QYK7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.2■□□□□ 0.83
Rnf11Q9QYK7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf11Q9QYK7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf11Q9QYK7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf11Q9QYK7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf11Q9QYK7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf11Q9QYK7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf11Q9QYK7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf11Q9QYK7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf11Q9QYK7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf11Q9QYK7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf11Q9QYK7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf11Q9QYK7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms