Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cabcoco1Q8CDT7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cabcoco1Q8CDT7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cabcoco1Q8CDT7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cabcoco1Q8CDT7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.31■□□□□ 0.84
Cabcoco1Q8CDT7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Cabcoco1Q8CDT7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cabcoco1Q8CDT7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cabcoco1Q8CDT7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cabcoco1Q8CDT7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cabcoco1Q8CDT7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cabcoco1Q8CDT7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.28■□□□□ 0.84
Cabcoco1Q8CDT7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Gm6311-201ENSMUST00000073790 878 ntBASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cabcoco1Q8CDT7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cabcoco1Q8CDT7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cabcoco1Q8CDT7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cabcoco1Q8CDT7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cabcoco1Q8CDT7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cabcoco1Q8CDT7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cabcoco1Q8CDT7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cabcoco1Q8CDT7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cabcoco1Q8CDT7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cabcoco1Q8CDT7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cabcoco1Q8CDT7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cabcoco1Q8CDT7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.22■□□□□ 0.83
Cabcoco1Q8CDT7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cabcoco1Q8CDT7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cabcoco1Q8CDT7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cabcoco1Q8CDT7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cabcoco1Q8CDT7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 166.3 ms